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Biotechnology Information local alignment search tool blast program
Local Alignment Search Tool Blast Program, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/aligner+program/blast+program/pmc13250765-64-8-19
Average 86 stars, based on 1 article reviews
local alignment search tool blast program - by Bioz Stars, 2026-10
86/100 stars

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Related Articles

Variant Assay:

Article Title: A combined transcriptomic and physiological approach to understanding the adaptive mechanisms to cope with oxidative stress in Fusarium graminearum .
Article Snippet: Filtered clean reads were then mapped to reference genome sequences downloaded from the National Center for Biotechnology Information using the Burrows-Wheeler Aligner (BWA) program (97).

Article Title: Targeting the tumor mutanome for personalized vaccination in a TMB low non-small cell lung cancer
Article Snippet: Gene alignment and variant calling Exome sequencing reads were aligned to the National Center for Biotechnology Information human genome reference sequence (GRCh37/hg19) using SpeedSeq/BurrowsWheeler Aligner software (v0.7.13).

Article Title: Mutational landscapes of tongue carcinoma reveal recurrent mutations in genes of therapeutic and prognostic relevance
Article Snippet: Read pairs were aligned to the National Center for Biotechnology Information (NCBI) human reference genome GRCh37 (hg19) using Burrows-Wheeler Aligner (BWA) software [ ].

Article Title: Whole exome sequencing identifies novel USH2A mutations and confirms Usher syndrome 2 diagnosis in Chinese retinitis pigmentosa patients
Article Snippet: The results were aligned to human genome reference (UCSC hg19) in the National Center for Biotechnology Information (NCBI) database using Burrows Wheeler Aligner Multi-Vision software package (BWA) for unique mapped reads.

Article Title: Whole exome sequencing analysis identifies novel Stargardt disease-related gene mutations in Chinese Stargardt disease and retinitis pigmentosa patients.
Article Snippet: Objectives To delineate the disease-causing mutations of the Stargardt disease-related genes in Chinese patients diagnosed with Stargardt disease or retinitis pigmentosa (RP) by whole exome sequencing analysis.. Methods A total of 123 sporadic RP or Stargardt disease patients and 2 Stargardt disease families were recruited.. All sporadic patients and the probands of the families were subjected to whole exome sequencing analysis.

Article Title: A combined transcriptomic and physiological approach to understanding the adaptive mechanisms to cope with oxidative stress in Fusarium graminearum
Article Snippet: Filtered clean reads were then mapped to reference genome sequences downloaded from the National Center for Biotechnology Information using the Burrows-Wheeler Aligner (BWA) program ( ).

Article Title: Targeting the tumor mutanome for personalized vaccination in a TMB low non-small cell lung cancer
Article Snippet: SUPPLEMENTARY METHODS Gene alignment and variant calling Exome sequencing reads were aligned to the National Center for Biotechnology Information human genome reference sequence (GRCh37/hg19) using SpeedSeq/BurrowsWheeler Aligner software (v0.7.13).

Sequencing:

Article Title: A combined transcriptomic and physiological approach to understanding the adaptive mechanisms to cope with oxidative stress in Fusarium graminearum .
Article Snippet: Filtered clean reads were then mapped to reference genome sequences downloaded from the National Center for Biotechnology Information using the Burrows-Wheeler Aligner (BWA) program (97).

Article Title: Targeting the tumor mutanome for personalized vaccination in a TMB low non-small cell lung cancer
Article Snippet: Gene alignment and variant calling Exome sequencing reads were aligned to the National Center for Biotechnology Information human genome reference sequence (GRCh37/hg19) using SpeedSeq/BurrowsWheeler Aligner software (v0.7.13).

Article Title: Mutational landscapes of tongue carcinoma reveal recurrent mutations in genes of therapeutic and prognostic relevance
Article Snippet: Read pairs were aligned to the National Center for Biotechnology Information (NCBI) human reference genome GRCh37 (hg19) using Burrows-Wheeler Aligner (BWA) software [ ].

Article Title: Whole exome sequencing identifies novel USH2A mutations and confirms Usher syndrome 2 diagnosis in Chinese retinitis pigmentosa patients
Article Snippet: The results were aligned to human genome reference (UCSC hg19) in the National Center for Biotechnology Information (NCBI) database using Burrows Wheeler Aligner Multi-Vision software package (BWA) for unique mapped reads.

Article Title: Whole exome sequencing analysis identifies novel Stargardt disease-related gene mutations in Chinese Stargardt disease and retinitis pigmentosa patients.
Article Snippet: Objectives To delineate the disease-causing mutations of the Stargardt disease-related genes in Chinese patients diagnosed with Stargardt disease or retinitis pigmentosa (RP) by whole exome sequencing analysis.. Methods A total of 123 sporadic RP or Stargardt disease patients and 2 Stargardt disease families were recruited.. All sporadic patients and the probands of the families were subjected to whole exome sequencing analysis.

Article Title: A combined transcriptomic and physiological approach to understanding the adaptive mechanisms to cope with oxidative stress in Fusarium graminearum
Article Snippet: Filtered clean reads were then mapped to reference genome sequences downloaded from the National Center for Biotechnology Information using the Burrows-Wheeler Aligner (BWA) program ( ).

Article Title: Targeting the tumor mutanome for personalized vaccination in a TMB low non-small cell lung cancer
Article Snippet: SUPPLEMENTARY METHODS Gene alignment and variant calling Exome sequencing reads were aligned to the National Center for Biotechnology Information human genome reference sequence (GRCh37/hg19) using SpeedSeq/BurrowsWheeler Aligner software (v0.7.13).

Software:

Article Title: A combined transcriptomic and physiological approach to understanding the adaptive mechanisms to cope with oxidative stress in Fusarium graminearum .
Article Snippet: Filtered clean reads were then mapped to reference genome sequences downloaded from the National Center for Biotechnology Information using the Burrows-Wheeler Aligner (BWA) program (97).

Article Title: Targeting the tumor mutanome for personalized vaccination in a TMB low non-small cell lung cancer
Article Snippet: Gene alignment and variant calling Exome sequencing reads were aligned to the National Center for Biotechnology Information human genome reference sequence (GRCh37/hg19) using SpeedSeq/BurrowsWheeler Aligner software (v0.7.13).

Article Title: Mutational landscapes of tongue carcinoma reveal recurrent mutations in genes of therapeutic and prognostic relevance
Article Snippet: Read pairs were aligned to the National Center for Biotechnology Information (NCBI) human reference genome GRCh37 (hg19) using Burrows-Wheeler Aligner (BWA) software [ ].

Article Title: Whole exome sequencing identifies novel USH2A mutations and confirms Usher syndrome 2 diagnosis in Chinese retinitis pigmentosa patients
Article Snippet: The results were aligned to human genome reference (UCSC hg19) in the National Center for Biotechnology Information (NCBI) database using Burrows Wheeler Aligner Multi-Vision software package (BWA) for unique mapped reads.

Article Title: Whole exome sequencing analysis identifies novel Stargardt disease-related gene mutations in Chinese Stargardt disease and retinitis pigmentosa patients.
Article Snippet: Objectives To delineate the disease-causing mutations of the Stargardt disease-related genes in Chinese patients diagnosed with Stargardt disease or retinitis pigmentosa (RP) by whole exome sequencing analysis.. Methods A total of 123 sporadic RP or Stargardt disease patients and 2 Stargardt disease families were recruited.. All sporadic patients and the probands of the families were subjected to whole exome sequencing analysis.

Article Title: A combined transcriptomic and physiological approach to understanding the adaptive mechanisms to cope with oxidative stress in Fusarium graminearum
Article Snippet: Filtered clean reads were then mapped to reference genome sequences downloaded from the National Center for Biotechnology Information using the Burrows-Wheeler Aligner (BWA) program ( ).

Article Title: Targeting the tumor mutanome for personalized vaccination in a TMB low non-small cell lung cancer
Article Snippet: SUPPLEMENTARY METHODS Gene alignment and variant calling Exome sequencing reads were aligned to the National Center for Biotechnology Information human genome reference sequence (GRCh37/hg19) using SpeedSeq/BurrowsWheeler Aligner software (v0.7.13).



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